Index

C

calculate_goodness_of_fit() (in module mcfine.fitting) check_overwrite() (in module mcfine.utils)

chi_square() (in module mcfine.fitting_funcs) create_fit_cube() (mcfine.HyperfineFitter method)

D

delta_bic_looper() (in module mcfine.fitting)

downsample() (in module mcfine.fitting) downsample_fitter() (mcfine.HyperfineFitter method)

E

emcee_wrapper() (in module mcfine.fitting)

encourage_spatial_coherence() (mcfine.HyperfineFitter method)

G

gaussian() (in module mcfine.line_shape_funcs) generate_radex_grid() (mcfine.HyperfineFitter method) get_burn_in_thin() (in module mcfine.emcee_funcs) get_dict_val() (in module mcfine.utils) get_fits_from_samples() (in module mcfine.fitting) get_nearest_value() (in module mcfine.radex_funcs)

get_nearest_values() (in module mcfine.radex_funcs) get_p0_lmfit() (in module mcfine.fitting) get_parameters_from_fitting() (in module mcfine.fitting) get_props() (mcfine.HyperfineFitter method) get_radex_multiple_components() (in module mcfine.fitting) get_samples() (in module mcfine.emcee_funcs) get_samples_from_fit_dict() (in module mcfine.emcee_funcs)

H

hyperfine_structure_lte() (in module mcfine.line_shape_funcs) hyperfine_structure_pure_gauss() (in module mcfine.line_shape_funcs)

hyperfine_structure_radex() (in module mcfine.line_shape_funcs) HyperfineFitter (class in mcfine) HyperfinePlotter (class in mcfine)

I

initial_lmfit() (in module mcfine.fitting)

initialise_mcfine_output() (mcfine.HyperfineFitter method) initialise_positions() (in module mcfine.fitting)

L

ln_like() (in module mcfine.fitting) ln_prior() (in module mcfine.fitting_funcs)

ln_prob() (in module mcfine.fitting) load_pkl() (in module mcfine.utils)

M

make_parameter_maps() (mcfine.HyperfineFitter method) mcfine.emcee_funcs module mcfine.fitting module mcfine.fitting_funcs module mcfine.line_shape_funcs module mcfine.plotting module mcfine.radex_funcs module

mcfine.utils module module mcfine.emcee_funcs mcfine.fitting mcfine.fitting_funcs mcfine.line_shape_funcs mcfine.plotting mcfine.radex_funcs mcfine.utils multicomponent_fitter() (mcfine.HyperfineFitter method) multiple_components() (in module mcfine.fitting)

P

parallel_corner() (in module mcfine.plotting) parallel_fit_samples() (in module mcfine.fitting) parallel_fitting() (in module mcfine.fitting) parallel_plot_fit() (in module mcfine.plotting) parallel_step() (in module mcfine.plotting) plot_corner() (in module mcfine.plotting) (mcfine.HyperfinePlotter method)

plot_fit() (in module mcfine.plotting) (mcfine.HyperfinePlotter method) plot_step() (in module mcfine.plotting) (mcfine.HyperfinePlotter method) print_config_params() (in module mcfine.utils)

R

radex_grid_interp() (in module mcfine.fitting) residual() (in module mcfine.fitting_funcs)

run_mcmc() (in module mcfine.fitting) run_mcmc_sampler() (in module mcfine.fitting)

S

sample_tpeak_per_component() (in module mcfine.fitting)

save_pkl() (in module mcfine.utils) setup_minimal_array() (mcfine.HyperfineFitter method)